Get the report for biological replicates. — getbiotechrep • enviGCMS

Get the report for biological replicates.

getbiotechrep(
  xset,
  method = "medret",
  intensity = "into",
  file = NULL,
  rsdcf = 30,
  inscf = 1000
)

Arguments

xset: the xcmsset object which for all of your technique replicates for bio replicated sample in single group
method: parameter for groupval function
intensity: parameter for groupval function
file: file name for further annotation, default NULL
rsdcf: rsd cutoff for peaks, default 30
inscf: intensity cutoff for peaks, default 0

Value

dataframe with mean, standard deviation and RSD for those technique replicates & biological replicates combined with raw data