Get the csv files to be submitted to Metaboanalyst — getupload3 • enviGCMS

Get the csv files to be submitted to Metaboanalyst

Usage

getupload3(list, name = "Peaklist")

Arguments

list: list with data as peaks list, mz, rt and group information
name: file name

Value

dataframe with data needed for Metaboanalyst if your want to perform local analysis.

See also

getmzrt, getmzrt2

Examples

if (FALSE) { # \dontrun{
library(faahKO)
cdfpath <- system.file('cdf', package = 'faahKO')
xset <- getdata2(cdfpath,
ppp = xcms::MatchedFilterParam(),
rtp = xcms::ObiwarpParam(),
gpp = xcms::PeakDensityParam())
xset <- enviGCMS::getmzrt2(xset)
getupload3(xset)
} # }