plot scatter plot for rt-mz profile and output gif file for multiple groups
Source:R/plotmzrt.R
gifmr.Rd
plot scatter plot for rt-mz profile and output gif file for multiple groups
Usage
gifmr(
list,
ms = c(100, 500),
rsdcf = 30,
inscf = 5,
imputation = "i",
name = "test",
...
)
Arguments
- list
list with data as peaks list, mz, rt and group information
- ms
the mass range to plot the data
- rsdcf
the rsd cutoff of all peaks in all group
- inscf
Log intensity cutoff for peaks across samples. If any peaks show a intensity higher than the cutoff in any samples, this peaks would not be filtered. default 5
- imputation
parameters for `getimputation` function method
- name
file name for gif file, default test
- ...
parameters for `plot` function
Examples
if (FALSE) { # \dontrun{
data(list)
gifmr(list)
} # }