plot the diff scatter plot for peaks list with threshold between two groups — plotmrc • enviGCMS

plot the diff scatter plot for peaks list with threshold between two groups

plotmrc(list, ms = c(100, 800), inscf = 5, rsdcf = 30, imputation = "l", ...)

Arguments

list: list with data as peaks list, mz, rt and group information
ms: the mass range to plot the data
inscf: Log intensity cutoff for peaks across samples. If any peaks show a intensity higher than the cutoff in any samples, this peaks would not be filtered. default 5
rsdcf: the rsd cutoff of all peaks in all group
imputation: parameters for `getimputation` function method
...: parameters for `plot` function

Examples

data(list)
plotmrc(list)