Plot EIC of certain m/z and return dataframe for integration — plotmsrt • enviGCMS

Plot EIC of certain m/z and return dataframe for integration

plotmsrt(data, ms, rt, n = FALSE)

Arguments

data: imported data matrix of GC-MS
ms: m/z to be extracted
rt: vector range of the retention time
n: logical smooth or not

Value

dataframe with with the first column RT and second column intensity of the SIM ions.

Examples

if (FALSE) {
matrix <- getmd(rawdata)
plotmsrt(matrix,rt = c(500,1000),ms = 300)
}