Filter the data based on row and column index

getfilter(list, rowindex = TRUE, colindex = TRUE, name = NULL, type = "o", ...)

Arguments

list: list with data as peaks list, mz, rt and group information
rowindex: logical, row index to keep
colindex: logical, column index to keep
name: file name for csv and/or eic file, default NULL
type: csv format for further analysis, m means Metaboanalyst, a means xMSannotator, p means Mummichog(NA values are imputed by `getimputation`, and F test is used here to generate stats and p value), o means full information csv (for `pmd` package), default o. mapo could output all those format files.
...: other parameters for `getcsv`

list with remain peaks, and filtered peaks index

data(list)
li <- getdoe(list)
lif <- getfilter(li,rowindex = li$rsdindex)